Bump mysql2 in /backend in the prod-patch-updates group

Bumps the prod-patch-updates group in /backend with 1 update: [mysql2](https://github.com/sidorares/node-mysql2).


Updates `mysql2` from 3.16.2 to 3.16.3
- [Release notes](https://github.com/sidorares/node-mysql2/releases)
- [Changelog](https://github.com/sidorares/node-mysql2/blob/master/Changelog.md)
- [Commits](https://github.com/sidorares/node-mysql2/compare/v3.16.2...v3.16.3)

---
updated-dependencies:
- dependency-name: mysql2
  dependency-version: 3.16.3
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: prod-patch-updates
...

Signed-off-by: dependabot[bot] <support@github.com>

.github/dependabot.yml

@@ -3,7 +3,7 @@ updates:
   - package-ecosystem: "npm"
     directory: "/backend"
     schedule:
-      interval: "daily"
+      interval: "weekly"
     groups:
       dev-patch-updates:
         dependency-type: "development"
@@ -25,7 +25,7 @@ updates:
   - package-ecosystem: "npm"
     directory: "/frontend"
     schedule:
-      interval: "daily"
+      interval: "weekly"
     groups:
       dev-patch-updates:
         dependency-type: "development"
@@ -47,7 +47,7 @@ updates:
   - package-ecosystem: "npm"
     directory: "/docs"
     schedule:
-      interval: "daily"
+      interval: "weekly"
     groups:
       dev-patch-updates:
         dependency-type: "development"
@@ -69,7 +69,7 @@ updates:
   - package-ecosystem: "npm"
     directory: "/test"
     schedule:
-      interval: "daily"
+      interval: "weekly"
     groups:
       dev-patch-updates:
         dependency-type: "development"
@@ -91,7 +91,7 @@ updates:
   - package-ecosystem: "docker"
     directory: "/docker"
     schedule:
-      interval: "daily"
+      interval: "weekly"
     groups:
       updates:
         update-types:

backend/internal/2fa.js

@@ -1,6 +1,6 @@
 import crypto from "node:crypto";
 import bcrypt from "bcrypt";
-import { authenticator } from "otplib";
+import { generateSecret, generateURI, verify } from "otplib";
 import errs from "../lib/error.js";
 import authModel from "../models/auth.js";
 import internalUser from "./user.js";
@@ -27,7 +27,6 @@ const generateBackupCodes = async () => {
 };
 
 const internal2fa = {
-
 	/**
 	 * Check if user has 2FA enabled
 	 * @param {number} userId
@@ -72,8 +71,12 @@ const internal2fa = {
 	startSetup: async (access, userId) => {
 		await access.can("users:password", userId);
 		const user = await internalUser.get(access, { id: userId });
-		const secret = authenticator.generateSecret();
+		const secret = generateSecret();
-		const otpauth_url = authenticator.keyuri(user.email, APP_NAME, secret);
+		const otpauth_url = generateURI({
+			issuer: APP_NAME,
+			label: user.email,
+			secret: secret,
+		});
 		const auth = await internal2fa.getUserPasswordAuth(userId);
 
 		// ensure user isn't already setup for 2fa
@@ -85,7 +88,8 @@ const internal2fa = {
 		const meta = auth.meta || {};
 		meta.totp_pending_secret = secret;
 
-		await authModel.query()
+		await authModel
+			.query()
 			.where("id", auth.id)
 			.andWhere("user_id", userId)
 			.andWhere("type", "password")
@@ -112,8 +116,8 @@ const internal2fa = {
 			throw new errs.ValidationError("No pending 2FA setup found");
 		}
 
-		const valid = authenticator.verify({ token: code, secret });
+		const result = await verify({ token: code, secret });
-		if (!valid) {
+		if (!result.valid) {
 			throw new errs.ValidationError("Invalid verification code");
 		}
 
@@ -156,12 +160,12 @@ const internal2fa = {
 			throw new errs.ValidationError("2FA is not enabled");
 		}
 
-		const valid = authenticator.verify({
+		const result = await verify({
 			token: code,
 			secret: auth.meta.totp_secret,
 		});
 
-		if (!valid) {
+		if (!result.valid) {
 			throw new errs.AuthError("Invalid verification code");
 		}
 
@@ -195,12 +199,12 @@ const internal2fa = {
 		}
 
 		// Try TOTP code first
-		const valid = authenticator.verify({
+		const result = await verify({
 			token,
 			secret,
 		});
 
-		if (valid) {
+		if (result.valid) {
 			return true;
 		}
 
@@ -248,12 +252,12 @@ const internal2fa = {
 			throw new errs.ValidationError("No 2FA secret found");
 		}
 
-		const valid = authenticator.verify({
+		const result = await verify({
 			token,
 			secret,
 		});
 
-		if (!valid) {
+		if (!result.valid) {
 			throw new errs.ValidationError("Invalid verification code");
 		}
 
@@ -271,11 +275,7 @@ const internal2fa = {
 	},
 
 	getUserPasswordAuth: async (userId) => {
-		const auth = await authModel
+		const auth = await authModel.query().where("user_id", userId).andWhere("type", "password").first();
-			.query()
-			.where("user_id", userId)
-			.andWhere("type", "password")
-			.first();
 
 		if (!auth) {
 			throw new errs.ItemNotFoundError("Auth not found");

backend/package.json

@@ -27,12 +27,12 @@
 		"liquidjs": "10.24.0",
 		"lodash": "^4.17.23",
 		"moment": "^2.30.1",
-		"mysql2": "^3.16.2",
+		"mysql2": "^3.16.3",
 		"node-rsa": "^1.1.1",
 		"objection": "3.1.5",
-		"otplib": "^12.0.1",
+		"otplib": "^13.2.1",
 		"path": "^0.12.7",
-		"pg": "^8.17.2",
+		"pg": "^8.18.0",
 		"proxy-agent": "^6.5.0",
 		"signale": "1.4.0",
 		"sqlite3": "^5.1.7",

backend/yarn.lock

@@ -111,6 +111,11 @@
     wrap-ansi "^8.1.0"
     wrap-ansi-cjs "npm:wrap-ansi@^7.0.0"
 
+"@noble/hashes@^2.0.1":
+  version "2.0.1"
+  resolved "https://registry.yarnpkg.com/@noble/hashes/-/hashes-2.0.1.tgz#fc1a928061d1232b0a52bb754393c37a5216c89e"
+  integrity sha512-XlOlEbQcE9fmuXxrVTXCTlG2nlRXa9Rj3rr5Ue/+tX+nmkgbX720YHh0VR3hBF9xDvwnb8D2shVGOwNx+ulArw==
+
 "@npmcli/fs@^1.0.0":
   version "1.1.1"
   resolved "https://registry.yarnpkg.com/@npmcli/fs/-/fs-1.1.1.tgz#72f719fe935e687c56a4faecf3c03d06ba593257"
@@ -127,49 +132,61 @@
     mkdirp "^1.0.4"
     rimraf "^3.0.2"
 
-"@otplib/core@^12.0.1":
+"@otplib/core@13.2.1":
-  version "12.0.1"
+  version "13.2.1"
-  resolved "https://registry.yarnpkg.com/@otplib/core/-/core-12.0.1.tgz#73720a8cedce211fe5b3f683cd5a9c098eaf0f8d"
+  resolved "https://registry.yarnpkg.com/@otplib/core/-/core-13.2.1.tgz#83449322a390b6b4c045b2e799cbd1f7718f1f64"
-  integrity sha512-4sGntwbA/AC+SbPhbsziRiD+jNDdIzsZ3JUyfZwjtKyc/wufl1pnSIaG4Uqx8ymPagujub0o92kgBnB89cuAMA==
+  integrity sha512-IyfHvYNCyipDxhmJdcUUvUeT3Hz84/GgM6G2G6BTEmnAKPzNA7U0kYGkxKZWY9h23W94RJk4qiClJRJN5zKGvg==
 
-"@otplib/plugin-crypto@^12.0.1":
+"@otplib/hotp@13.2.1":
-  version "12.0.1"
+  version "13.2.1"
-  resolved "https://registry.yarnpkg.com/@otplib/plugin-crypto/-/plugin-crypto-12.0.1.tgz#2b42c624227f4f9303c1c041fca399eddcbae25e"
+  resolved "https://registry.yarnpkg.com/@otplib/hotp/-/hotp-13.2.1.tgz#6149c877e5a51fd1c527ada535fe75ca4f525eee"
-  integrity sha512-qPuhN3QrT7ZZLcLCyKOSNhuijUi9G5guMRVrxq63r9YNOxxQjPm59gVxLM+7xGnHnM6cimY57tuKsjK7y9LM1g==
+  integrity sha512-iRKqvj0TnemtXXtEswzBX50Z0yMNa0lH9PSdr5N4CJc1mDEuUmFFZQqnu3PfA3fPd3WeAU+mHgmK/xq18+K1QA==
   dependencies:
-    "@otplib/core" "^12.0.1"
+    "@otplib/core" "13.2.1"
+    "@otplib/uri" "13.2.1"
 
-"@otplib/plugin-thirty-two@^12.0.1":
+"@otplib/plugin-base32-scure@13.2.1":
-  version "12.0.1"
+  version "13.2.1"
-  resolved "https://registry.yarnpkg.com/@otplib/plugin-thirty-two/-/plugin-thirty-two-12.0.1.tgz#5cc9b56e6e89f2a1fe4a2b38900ca4e11c87aa9e"
+  resolved "https://registry.yarnpkg.com/@otplib/plugin-base32-scure/-/plugin-base32-scure-13.2.1.tgz#2e7b1849311bfafd630fa87ce2812b7c3c718675"
-  integrity sha512-MtT+uqRso909UkbrrYpJ6XFjj9D+x2Py7KjTO9JDPhL0bJUYVu5kFP4TFZW4NFAywrAtFRxOVY261u0qwb93gA==
+  integrity sha512-vnA2qqgJ/FbFbDNGOLAS8dKfCsJFXwFsZKYklE8yl2INkCOUR0vbVdJ2TVmufzC8R1RRZHW+cDR20ACgc9XFYg==
   dependencies:
-    "@otplib/core" "^12.0.1"
+    "@otplib/core" "13.2.1"
-    thirty-two "^1.0.2"
+    "@scure/base" "^2.0.0"
 
-"@otplib/preset-default@^12.0.1":
+"@otplib/plugin-crypto-noble@13.2.1":
-  version "12.0.1"
+  version "13.2.1"
-  resolved "https://registry.yarnpkg.com/@otplib/preset-default/-/preset-default-12.0.1.tgz#cb596553c08251e71b187ada4a2246ad2a3165ba"
+  resolved "https://registry.yarnpkg.com/@otplib/plugin-crypto-noble/-/plugin-crypto-noble-13.2.1.tgz#11f6325f4593f57360af2268313b94003b225807"
-  integrity sha512-xf1v9oOJRyXfluBhMdpOkr+bsE+Irt+0D5uHtvg6x1eosfmHCsCC6ej/m7FXiWqdo0+ZUI6xSKDhJwc8yfiOPQ==
+  integrity sha512-Dxjmt4L+5eDWJf5EvbcMp+fxcliyKoB9N9sNQq/vuVAUvq+KiqpiiCQZ/wHyrN0ArB0NdevtK1KByyAq080ldg==
   dependencies:
-    "@otplib/core" "^12.0.1"
+    "@noble/hashes" "^2.0.1"
-    "@otplib/plugin-crypto" "^12.0.1"
+    "@otplib/core" "13.2.1"
-    "@otplib/plugin-thirty-two" "^12.0.1"
 
-"@otplib/preset-v11@^12.0.1":
+"@otplib/totp@13.2.1":
-  version "12.0.1"
+  version "13.2.1"
-  resolved "https://registry.yarnpkg.com/@otplib/preset-v11/-/preset-v11-12.0.1.tgz#4c7266712e7230500b421ba89252963c838fc96d"
+  resolved "https://registry.yarnpkg.com/@otplib/totp/-/totp-13.2.1.tgz#2c8f8a8d87cf6e440d9050d363dfd24bc25179d6"
-  integrity sha512-9hSetMI7ECqbFiKICrNa4w70deTUfArtwXykPUvSHWOdzOlfa9ajglu7mNCntlvxycTiOAXkQGwjQCzzDEMRMg==
+  integrity sha512-LzDzAAK3w8rspF3urBnWjOlxso1SCGxX9Pnu/iy+HkC0y0HgiLsW7jhkr2hJ3u4cyBdL/tOKUhhELwsjyvunwQ==
   dependencies:
-    "@otplib/core" "^12.0.1"
+    "@otplib/core" "13.2.1"
-    "@otplib/plugin-crypto" "^12.0.1"
+    "@otplib/hotp" "13.2.1"
-    "@otplib/plugin-thirty-two" "^12.0.1"
+    "@otplib/uri" "13.2.1"
+
+"@otplib/uri@13.2.1":
+  version "13.2.1"
+  resolved "https://registry.yarnpkg.com/@otplib/uri/-/uri-13.2.1.tgz#50054fe922f3610e7558b0c5337353770c1f382e"
+  integrity sha512-ssYnfiUrFTs/rPRUW8h59m0MVLYOC+UKk7tVGYgtG15lLaLBrNBQjM2YFanuzn9Jm4iv9JxiNG7TRkwcnyR09A==
+  dependencies:
+    "@otplib/core" "13.2.1"
 
 "@pkgjs/parseargs@^0.11.0":
   version "0.11.0"
   resolved "https://registry.yarnpkg.com/@pkgjs/parseargs/-/parseargs-0.11.0.tgz#a77ea742fab25775145434eb1d2328cf5013ac33"
   integrity sha512-+1VkjdD0QBLPodGrJUeqarH8VAIvQODIbwh9XpP5Syisf7YoQgsJKPNFoqqLQlu+VQ/tVSshMR6loPMn8U+dPg==
 
+"@scure/base@^2.0.0":
+  version "2.0.0"
+  resolved "https://registry.yarnpkg.com/@scure/base/-/base-2.0.0.tgz#ba6371fddf92c2727e88ad6ab485db6e624f9a98"
+  integrity sha512-3E1kpuZginKkek01ovG8krQ0Z44E3DHPjc5S2rjJw9lZn3KSQOs8S7wqikF/AH7iRanHypj85uGyxk0XAyC37w==
+
 "@tootallnate/once@1":
   version "1.1.2"
   resolved "https://registry.yarnpkg.com/@tootallnate/once/-/once-1.1.2.tgz#ccb91445360179a04e7fe6aff78c00ffc1eeaf82"
@@ -1836,10 +1853,10 @@ ms@^2.0.0, ms@^2.1.1, ms@^2.1.3:
   resolved "https://registry.yarnpkg.com/ms/-/ms-2.1.3.tgz#574c8138ce1d2b5861f0b44579dbadd60c6615b2"
   integrity sha512-6FlzubTLZG3J2a/NVCAleEhjzq5oxgHyaCU9yYXvcLsvoVaHJq/s5xXI6/XXP6tz7R9xAOtHnSO/tXtF3WRTlA==
 
-mysql2@^3.16.2:
+mysql2@^3.16.3:
-  version "3.16.2"
+  version "3.16.3"
-  resolved "https://registry.yarnpkg.com/mysql2/-/mysql2-3.16.2.tgz#b56d8917bfbc01af02f9c301029c019868b6ab6d"
+  resolved "https://registry.yarnpkg.com/mysql2/-/mysql2-3.16.3.tgz#59491bfa13f1979c2a87fd1ef68a3eb83fd58fcb"
-  integrity sha512-JsqBpYNy7pH20lGfPuSyRSIcCxSeAIwxWADpV64nP9KeyN3ZKpHZgjKXuBKsh7dH6FbOvf1bOgoVKjSUPXRMTw==
+  integrity sha512-+3XhQEt4FEFuvGV0JjIDj4eP2OT/oIj/54dYvqhblnSzlfcxVOuj+cd15Xz6hsG4HU1a+A5+BA9gm0618C4z7A==
   dependencies:
     aws-ssl-profiles "^1.1.2"
     denque "^2.1.0"
@@ -1994,14 +2011,17 @@ once@^1.3.0, once@^1.3.1, once@^1.4.0:
   dependencies:
     wrappy "1"
 
-otplib@^12.0.1:
+otplib@^13.2.1:
-  version "12.0.1"
+  version "13.2.1"
-  resolved "https://registry.yarnpkg.com/otplib/-/otplib-12.0.1.tgz#c1d3060ab7aadf041ed2960302f27095777d1f73"
+  resolved "https://registry.yarnpkg.com/otplib/-/otplib-13.2.1.tgz#39cc114228409ff30cfa6779e2f8cb007b535942"
-  integrity sha512-xDGvUOQjop7RDgxTQ+o4pOol0/3xSZzawTiPKRrHnQWAy0WjhNs/5HdIDJCrqC4MBynmjXgULc6YfioaxZeFgg==
+  integrity sha512-Cft9h/m34LtvnoB2TjP1E1E6v0biwcUntl6U4e+HgWrTa0bpwmb+u/D9gLFA+U6/ztlvrult0811Bu30nUVUuA==
   dependencies:
-    "@otplib/core" "^12.0.1"
+    "@otplib/core" "13.2.1"
-    "@otplib/preset-default" "^12.0.1"
+    "@otplib/hotp" "13.2.1"
-    "@otplib/preset-v11" "^12.0.1"
+    "@otplib/plugin-base32-scure" "13.2.1"
+    "@otplib/plugin-crypto-noble" "13.2.1"
+    "@otplib/totp" "13.2.1"
+    "@otplib/uri" "13.2.1"
 
 p-limit@^1.1.0:
   version "1.3.0"
@@ -2144,10 +2164,10 @@ pg-connection-string@2.6.2:
   resolved "https://registry.yarnpkg.com/pg-connection-string/-/pg-connection-string-2.6.2.tgz#713d82053de4e2bd166fab70cd4f26ad36aab475"
   integrity sha512-ch6OwaeaPYcova4kKZ15sbJ2hKb/VP48ZD2gE7i1J+L4MspCtBMAx8nMgz7bksc7IojCIIWuEhHibSMFH8m8oA==
 
-pg-connection-string@^2.10.1:
+pg-connection-string@^2.11.0:
-  version "2.10.1"
+  version "2.11.0"
-  resolved "https://registry.yarnpkg.com/pg-connection-string/-/pg-connection-string-2.10.1.tgz#34e0bf60333551ae1e76caf47cce633a5b2e4b70"
+  resolved "https://registry.yarnpkg.com/pg-connection-string/-/pg-connection-string-2.11.0.tgz#5dca53ff595df33ba9db812e181b19909866d10b"
-  integrity sha512-iNzslsoeSH2/gmDDKiyMqF64DATUCWj3YJ0wP14kqcsf2TUklwimd+66yYojKwZCA7h2yRNLGug71hCBA2a4sw==
+  integrity sha512-kecgoJwhOpxYU21rZjULrmrBJ698U2RxXofKVzOn5UDj61BPj/qMb7diYUR1nLScCDbrztQFl1TaQZT0t1EtzQ==
 
 pg-int8@1.0.1:
   version "1.0.1"
@@ -2175,12 +2195,12 @@ pg-types@2.2.0:
     postgres-date "~1.0.4"
     postgres-interval "^1.1.0"
 
-pg@^8.17.2:
+pg@^8.18.0:
-  version "8.17.2"
+  version "8.18.0"
-  resolved "https://registry.yarnpkg.com/pg/-/pg-8.17.2.tgz#8df8c039c36bb97016be276094fc4991e8683963"
+  resolved "https://registry.yarnpkg.com/pg/-/pg-8.18.0.tgz#e9ee214206f5d9231240f1b82f22d2fa9de5cb75"
-  integrity sha512-vjbKdiBJRqzcYw1fNU5KuHyYvdJ1qpcQg1CeBrHFqV1pWgHeVR6j/+kX0E1AAXfyuLUGY1ICrN2ELKA/z2HWzw==
+  integrity sha512-xqrUDL1b9MbkydY/s+VZ6v+xiMUmOUk7SS9d/1kpyQxoJ6U9AO1oIJyUWVZojbfe5Cc/oluutcgFG4L9RDP1iQ==
   dependencies:
-    pg-connection-string "^2.10.1"
+    pg-connection-string "^2.11.0"
     pg-pool "^3.11.0"
     pg-protocol "^1.11.0"
     pg-types "2.2.0"
@@ -2856,11 +2876,6 @@ text-decoder@^1.1.0:
   dependencies:
     b4a "^1.6.4"
 
-thirty-two@^1.0.2:
-  version "1.0.2"
-  resolved "https://registry.yarnpkg.com/thirty-two/-/thirty-two-1.0.2.tgz#4ca2fffc02a51290d2744b9e3f557693ca6b627a"
-  integrity sha512-OEI0IWCe+Dw46019YLl6V10Us5bi574EvlJEOcAkB29IzQ/mYD1A6RyNHLjZPiHCmuodxvgF6U+vZO1L15lxVA==
-
 tildify@2.0.0:
   version "2.0.0"
   resolved "https://registry.yarnpkg.com/tildify/-/tildify-2.0.0.tgz#f205f3674d677ce698b7067a99e949ce03b4754a"

frontend/package.json

@@ -32,7 +32,7 @@
 		"react": "^19.2.4",
 		"react-bootstrap": "^2.10.10",
 		"react-dom": "^19.2.4",
-		"react-intl": "^8.1.2",
+		"react-intl": "^8.1.3",
 		"react-markdown": "^10.1.0",
 		"react-router-dom": "^7.13.0",
 		"react-select": "^5.10.2",
@@ -52,7 +52,7 @@
 		"@types/react-dom": "^19.2.3",
 		"@types/react-table": "^7.7.20",
 		"@vitejs/plugin-react": "^5.1.3",
-		"happy-dom": "^20.4.0",
+		"happy-dom": "^20.5.0",
 		"postcss": "^8.5.6",
 		"postcss-simple-vars": "^7.0.1",
 		"sass": "^1.97.3",

frontend/yarn.lock

@@ -1632,10 +1632,10 @@ globrex@^0.1.2:
   resolved "https://registry.npmjs.org/globrex/-/globrex-0.1.2.tgz"
   integrity sha512-uHJgbwAMwNFf5mLst7IWLNg14x1CkeqglJb/K3doi4dw6q2IvAAmM/Y81kevy83wP+Sst+nutFTYOGg3d1lsxg==
 
-happy-dom@^20.4.0:
+happy-dom@^20.5.0:
-  version "20.4.0"
+  version "20.5.0"
-  resolved "https://registry.yarnpkg.com/happy-dom/-/happy-dom-20.4.0.tgz#83d1aa589cf4b4908a2f14e9596196afeb30e9e6"
+  resolved "https://registry.yarnpkg.com/happy-dom/-/happy-dom-20.5.0.tgz#64899aad7272f7e02a728e231bc9c151b872a3a5"
-  integrity sha512-RDeQm3dT9n0A5f/TszjUmNCLEuPnMGv3Tv4BmNINebz/h17PA6LMBcxJ5FrcqltNBMh9jA/8ufgDdBYUdBt+eg==
+  integrity sha512-VQe+Q5CYiGOgcCERXhcfNsbnrN92FDEKciMH/x6LppU9dd0j4aTjCTlqONFOIMcAm/5JxS3+utowbXV1OoFr+g==
   dependencies:
     "@types/node" ">=20.0.0"
     "@types/whatwg-mimetype" "^3.0.2"
@@ -2501,10 +2501,10 @@ react-fast-compare@^2.0.1:
   resolved "https://registry.npmjs.org/react-fast-compare/-/react-fast-compare-2.0.4.tgz"
   integrity sha512-suNP+J1VU1MWFKcyt7RtjiSWUjvidmQSlqu+eHslq+342xCbGTYmC0mEhPCOHxlW0CywylOC1u2DFAT+bv4dBw==
 
-react-intl@^8.1.2:
+react-intl@^8.1.3:
-  version "8.1.2"
+  version "8.1.3"
-  resolved "https://registry.yarnpkg.com/react-intl/-/react-intl-8.1.2.tgz#e8a6dde84d9682bef5fa775077beb9b5b8ff9547"
+  resolved "https://registry.yarnpkg.com/react-intl/-/react-intl-8.1.3.tgz#216e0a916c40a535c590995c3103fe9e2525d2e4"
-  integrity sha512-mwjljlxC1dpU7G6cznkxMWtYuKZruSNSVHZjiIWfYW6aNsHNDvDWDK54rM8yoF86asNLpk4Y3HxcWhX1AslTGg==
+  integrity sha512-eL1/d+uQdnapirynOGAriW0K9uAoyarjRGL3V9LaTRuohNSvPgCfJX06EZl5M52h/Hu7Gz7A1sD7dNHcos1lNg==
   dependencies:
     "@formatjs/ecma402-abstract" "3.1.1"
     "@formatjs/icu-messageformat-parser" "3.5.1"